PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_00816.1_g00014.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 449aa    MW: 50061.5 Da    PI: 7.4048
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_00816.1_g00014.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.31e-10150178533
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                              k  rr+++NReAAr+sR+RKka++++Le 
  Rsa1.0_00816.1_g00014.1 150 KTLRRLAQNREAARKSRLRKKAYVQQLES 178
                              7789***********************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.0E-9142194No hitNo description
SMARTSM003389.4E-7146234IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.737148192IPR004827Basic-leucine zipper domain
CDDcd147081.59E-22150202No hitNo description
SuperFamilySSF579592.41E-7150191No hitNo description
PfamPF001709.3E-8150180IPR004827Basic-leucine zipper domain
PROSITE patternPS000360153168IPR004827Basic-leucine zipper domain
PfamPF141442.8E-30243317IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MQGHHQNHHQ QLSSATSSSG NFMNKDGYDL GEIDPSLFLY LDGQGHHVDP PSTAPLPHHH  60
TTQNLAMRPP TSTLNIFPSK PMHIEPPPSS SRPNAVAPSG STRPSSEPSM DLTNHSQFQL  120
PQPSKPIKKE GNRKGLASSD HDTPKSSDPK TLRRLAQNRE AARKSRLRKK AYVQQLESCR  180
IKLTQLEQEI QRARSQGVFY GGSLIGGDQQ QGGLPIGPSY TSSEAAVFDM EYTRWLEEQQ  240
RLLTELRVAT QEHLAENELR MFVDTCLAHY DHLINLKAMV AKTDVFHIIS GAWKTPAERC  300
FLWMGGFRPS EIIKVIVNQI EPLTEQQIVG ICGLQQSTHE AEEALSQGLE ALNQSLSDSI  360
VSDSLSPASA QLPPHLSNFM SHMSLALNKL SSLEGFVLQA DNLRHQTIHR LNQLLTTRQE  420
ARCILAVAEY FHRLQALSSL WLARPRQDG
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ1327420.0HQ132742.1 Arabidopsis thaliana bZIP65 (At5g06839) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013715693.10.0PREDICTED: transcription factor TGA2-like isoform X1
RefseqXP_013715694.10.0PREDICTED: transcription factor TGA2-like isoform X2
SwissprotQ415581e-124HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A078BZF40.0A0A078BZF4_BRANA; BnaA10g24100D protein
STRINGAT5G06839.30.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM72072843
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.30.0bZIP family protein